(plaintiff notified that a livestock waste control facility required and plaintiff hired defendant to provide environmental consulting services and submit permit application to state for construction and operation of livestock waste control facility; defendant submitted incomplete application and missed deadline for resubmitted application; EPA issued compliance order to plaintiff and notice of violation of CWA; plaintiff sued for breach of contract, negligence and breach of warranty; trial court granted summary judgment for plaintiff on negligence claim which was affirmed on appeal, but issue of material fact remained as to causation of plaintiff’s damages so summary judgment for plaintiff on that issue reversed).